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ybgC protein (Pasteurella multocida) - STRING interaction network
"ybgC" - thio_ybgC: tol-pal system-associated acyl-CoA thioesterase in Pasteurella multocida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybgCthio_ybgC- tol-pal system-associated acyl-CoA thioesterase (136 aa)    
Predicted Functional Partners:
tolQ
tolQ- protein TolQ (225 aa)
   
  0.980
cydB
cydB- cytochrome d ubiquinol oxidase, subunit II (378 aa)
            0.859
tolR
annotation not available (140 aa)
   
   
  0.818
tolB
Translocation protein TolB; propeller_TolB- Tol-Pal system beta propeller repeat protein TolB (432 aa)
 
   
  0.785
tolA
Cell envelope integrity inner membrane protein TolA; tolA_full- protein TolA (389 aa)
   
   
  0.694
pal
Pal_lipo- peptidoglycan-associated lipoprotein (150 aa)
         
  0.593
guaA
guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain (523 aa)
     
   
  0.591
DR93_1004
cyd_oper_ybgE- cyd operon protein YbgE (95 aa)
         
  0.546
tesB
tesB- acyl-CoA thioesterase II (292 aa)
   
   
  0.521
dtd
D-aminoacyl-tRNA deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl- tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality (144 aa)
           
  0.476
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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