STRINGSTRING
pal protein (Pasteurella multocida) - STRING interaction network
"pal" - Pal_lipo: peptidoglycan-associated lipoprotein in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
palPal_lipo- peptidoglycan-associated lipoprotein (150 aa)    
Predicted Functional Partners:
tolB
Translocation protein TolB; propeller_TolB- Tol-Pal system beta propeller repeat protein TolB (432 aa)
 
  0.998
tolR
annotation not available (140 aa)
 
 
  0.921
tolQ
tolQ- protein TolQ (225 aa)
 
 
  0.917
lolA
lolA- outer membrane lipocarrier protein LolA (205 aa)
 
 
  0.813
yaeT
Uncharacterized protein; OM_YaeT- outer membrane assembly complex, YaeT protein (791 aa)
   
 
  0.805
lolE
Outer membrane-specific lipoprotein transporter subunit LolE; lolE_release- liporeleasing system, transmembrane protein LolE (417 aa)
   
 
  0.768
DR93_1338
Uncharacterized protein; lolCE- liporeleasing system, transmembrane , LolC/E family protein (396 aa)
   
 
  0.741
tolA
Cell envelope integrity inner membrane protein TolA; tolA_full- protein TolA (389 aa)
   
 
  0.723
lolB
lolB- outer membrane lipoprotein LolB (205 aa)
     
      0.620
rpmF
rpmF_bact- ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family (56 aa)
     
      0.616
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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