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rimI protein (Pasteurella multocida) - STRING interaction network
rimI: ribosomal-protein-alanine acetyltransferase in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimIrimI- ribosomal-protein-alanine acetyltransferase (147 aa)    
Predicted Functional Partners:
DR93_1020
DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The exact function of the psi subunit is unknown (136 aa)
   
   
  0.921
yeaZ
Uncharacterized protein; T6A_YeaZ- tRNA threonylcarbamoyl adenosine modification protein YeaZ (239 aa)
 
 
  0.791
DR93_1021
annotation not available (328 aa)
   
      0.690
rplA
rplA_bact- ribosomal protein L1; Belongs to the universal ribosomal protein uL1 family (229 aa)
           
  0.663
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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