STRINGSTRING
udk protein (Pasteurella multocida) - STRING interaction network
"udk" - Udk: uridine kinase in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
udkUdk- uridine kinase (216 aa)    
Predicted Functional Partners:
upp
Upp- uracil phosphoribosyltransferase (208 aa)
 
  0.980
pyrH
pyrH_bact- UMP kinase (242 aa)
   
 
  0.939
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2’-deoxycytidine for UMP synthesis (297 aa)
   
 
  0.933
udp
Uridine-psphlse- uridine phosphorylase; Belongs to the PNP/UDP phosphorylase family (252 aa)
     
  0.924
pyrF
pyrF- orotidine 5’-phosphate decarboxylase (233 aa)
   
 
  0.918
cmk
Cmk- cytidylate kinase (222 aa)
     
 
  0.918
cpdB
Bifunctional 2’,3’-cyclic nucleotide 2’-phosphodiesterase/3’-nucleotidase periplasmic protein; cycNucDiestase- 2’,3’-cyclic-nucleotide 2’-phosphodiesterase (656 aa)
 
 
    0.914
mazG
Nucleoside triphosphate pyrophosphohydrolase; mazG- MazG family protein (266 aa)
   
 
  0.905
DR93_1255
annotation not available (442 aa)
       
    0.900
DR93_759
annotation not available (181 aa)
         
    0.900
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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