STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1042annotation not available (468 aa)    
Predicted Functional Partners:
napH
Quinol dehydrogenase membrane component; napH_: ferredoxin-type , NapH/MauN family protein
 
 
 0.508
purA
purA: adenylosuccinate synthase
  
    0.492
hemE
hemE: uroporphyrinogen decarboxylase
      
 0.489
DR93_2075
2a37: transporter, monovalent cation:proton antiporter-2 family protein
     
 0.482
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems
     
 0.462
DR93_417
Conserved hypothetical protein
  
  
 0.462
katA
annotation not available
    
 
 0.453
degS
DegS; protease_degS: periplasmic serine peptidase DegS
      
 0.424
dnaK
prok_dnaK: chaperone protein DnaK; Belongs to the heat shock protein 70 family
      
 0.416
nrdD
nrdD: anaerobic ribonucleoside-triphosphate reductase
       0.415
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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