STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mplUDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase (457 aa)    
Predicted Functional Partners:
recJ
Uncharacterized protein; recJ: single-stranded-DNA-specific exonuclease RecJ
 
   0.809
DR93_1051
annotation not available
  
    0.674
murG
murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
  
 0.630
ddl
D_ala_D_alaTIGR: D-alanine--D-alanine ligase family protein
  
 0.597
murE
annotation not available
 
 0.539
DR93_2002
Beta-hexosaminidase; Glycosyl hydrolase family 3 N terminal domain protein
  
  
 0.531
gshAB
Glu_cys_lig_rel: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase; Belongs to the glutamate--cysteine ligase type 1 family
  
  
 0.529
mraY
mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase
  
 0.518
alr
Alr: alanine racemase
  
  
 0.485
ribD
eubact_ribD: riboflavin biosynthesis protein RibD
  
  
 0.476
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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