STRINGSTRING
rlmL protein (Pasteurella multocida) - STRING interaction network
"rlmL" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rlmLannotation not available (719 aa)    
Predicted Functional Partners:
mnmC
annotation not available (672 aa)
   
 
  0.840
thiI
annotation not available (480 aa)
 
   
  0.789
mukF
annotation not available (441 aa)
     
   
  0.768
rfaE
Bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; rfaE_dom_I- bifunctional protein RfaE, domain I (476 aa)
     
        0.734
arcB
annotation not available (618 aa)
   
   
  0.727
pyrD
pyrD_sub2- dihydroorotate dehydrogenase (339 aa)
   
   
  0.715
DR93_1090
Uncharacterized protein (238 aa)
 
   
  0.699
rlmB
annotation not available (245 aa)
   
 
  0.698
prmA
prmA- ribosomal protein L11 methyltransferase (293 aa)
 
     
  0.692
DR93_464
annotation not available (463 aa)
     
 
  0.691
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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