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cas1 protein (Pasteurella multocida) - STRING interaction network
"cas1" - Cas1: CRISPR-associated endonuclease Cas1 in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cas1Cas1- CRISPR-associated endonuclease Cas1 (326 aa)    
Predicted Functional Partners:
cas3
Cas3_yersinia- CRISPR-associated helicase Cas3, subtype I-F/YPEST (1106 aa)
 
   
  0.992
DR93_1083
annotation not available (335 aa)
 
        0.920
DR93_1082
annotation not available (327 aa)
 
          0.836
DR93_1081
annotation not available (444 aa)
 
          0.836
DR93_1084
annotation not available (186 aa)
   
          0.784
arcB
annotation not available (618 aa)
   
      0.698
DR93_1892
Uncharacterized protein (264 aa)
     
        0.441
rnt
RNaseT- ribonuclease T (220 aa)
   
 
  0.421
dnaQ
dnaQ_proteo- DNA polymerase III, epsilon subunit (253 aa)
   
 
  0.421
DR93_1088
Uncharacterized protein (196 aa)
              0.417
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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