STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcBannotation not available (618 aa)    
Predicted Functional Partners:
DR93_1845
Two-component response regulator; Transcriptional regulatory , C terminal family protein
 0.996
DR93_47
annotation not available
 
 0.990
DR93_226
annotation not available
 
 0.989
phoB
phoB: phosphate regulon transcriptional regulatory protein PhoB
 
 0.982
DR93_1850
YgiX; Transcriptional regulatory , C terminal family protein
 
 0.982
uhpA
annotation not available
 
 
 
 0.905
DR93_126
annotation not available
 
 
 
 0.903
torY
annotation not available
    
 
 0.889
torC
Uncharacterized protein; torC: trimethylamine-N-oxide reductase c-type cytochrome TorC
    
 
 0.889
DR93_447
napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family protein
    
 
 0.889
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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