STRINGSTRING
suhB protein (Pasteurella multocida) - STRING interaction network
"suhB" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
suhBannotation not available (267 aa)    
Predicted Functional Partners:
DR93_1107
annotation not available (305 aa)
       
  0.825
hisG
hisG- ATP phosphoribosyltransferase (299 aa)
   
   
  0.745
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (157 aa)
           
  0.647
hisE
Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family (201 aa)
   
   
  0.635
DR93_1090
Uncharacterized protein (238 aa)
   
        0.634
hisB
annotation not available (363 aa)
   
   
  0.611
rpsJ
rpsJ_bact- ribosomal protein S10 (103 aa)
     
   
  0.589
polA
Pola- DNA polymerase I (930 aa)
   
   
  0.575
nusG
Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination (183 aa)
           
  0.574
iscR
Uncharacterized protein; iscR- iron-sulfur cluster assembly transcription factor IscR (154 aa)
              0.533
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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