STRINGSTRING
DR93_1090 protein (Pasteurella multocida) - STRING interaction network
"DR93_1090" - Uncharacterized protein in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1090Uncharacterized protein (238 aa)    
Predicted Functional Partners:
cysS
Cysteinyl-tRNA synthetase; cysS- cysteine--tRNA ligase (459 aa)
 
        0.767
iscR
Uncharacterized protein; iscR- iron-sulfur cluster assembly transcription factor IscR (154 aa)
   
        0.709
rlmL
annotation not available (719 aa)
 
   
  0.699
suhB
annotation not available (267 aa)
   
        0.634
iscS
iscS- cysteine desulfurase IscS (404 aa)
   
        0.627
dusA
yjbN- tRNA dihydrouridine synthase A family protein (327 aa)
   
   
  0.580
rrmJ
rrmJ- ribosomal RNA large subunit methyltransferase J (209 aa)
   
 
  0.541
rlmB
annotation not available (245 aa)
     
   
  0.502
trmL
tRNA_yibK_trmL- tRNA (cytidine(34)-2’-O)-methyltransferase (158 aa)
           
  0.477
truB
truB- tRNA pseudouridine(55) synthase (304 aa)
     
   
  0.470
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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