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DR93_1105 protein (Pasteurella multocida) - STRING interaction network
"DR93_1105" - OmpW in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1105OmpW; OMP85_target- outer membrane insertion C-terminal signal domain protein (204 aa)    
Predicted Functional Partners:
ompA
annotation not available (352 aa)
         
  0.591
DR93_1102
Uncharacterized protein (147 aa)
              0.444
ispZ
ispZ- intracellular septation protein A (184 aa)
              0.444
DR93_1104
annotation not available (254 aa)
              0.442
yhb1
annotation not available (384 aa)
           
  0.428
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (209 aa)
           
  0.426
frdB
annotation not available (256 aa)
     
 
  0.417
DR93_1101
YciI-like protein (98 aa)
              0.416
torA
torA- trimethylamine-N-oxide reductase TorA (823 aa)
     
   
  0.405
hemN
hemN- oxygen-independent coproporphyrinogen III oxidase (455 aa)
 
   
  0.402
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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