STRINGSTRING
ispB protein (Pasteurella multocida) - STRING interaction network
"ispB" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ispBannotation not available (323 aa)    
Predicted Functional Partners:
uppS
Undecaprenyl pyrophosphate synthase; uppS- di-trans,poly-cis-decaprenylcistransferase (240 aa)
 
  0.949
ubiA
ubiA_proteo- 4-hydroxybenzoate polyprenyl transferase; Belongs to the UbiA prenyltransferase family (287 aa)
 
 
  0.930
DR93_1308
annotation not available (295 aa)
   
 
0.920
menA
menA- 1,4-dihydroxy-2-naphthoate octaprenyltransferase (301 aa)
       
  0.824
xseB
Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family (81 aa)
   
   
  0.780
DR93_1908
annotation not available (110 aa)
 
        0.707
polA
Pola- DNA polymerase I (930 aa)
   
   
  0.667
ftsY
Uncharacterized protein; ftsY- signal recognition particle-docking protein FtsY (459 aa)
 
 
  0.641
DR93_1119
Uncharacterized protein (233 aa)
         
  0.624
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (103 aa)
   
        0.618
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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