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cgtA protein (Pasteurella multocida) - STRING interaction network
"cgtA" - obg_CgtA: Obg family GTPase CgtA in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgtAobg_CgtA- Obg family GTPase CgtA (390 aa)    
Predicted Functional Partners:
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (103 aa)
 
  0.969
lepA
lepA- GTP-binding protein LepA (598 aa)
   
   
  0.912
DR93_1124
annotation not available (305 aa)
   
      0.902
DR93_1123
annotation not available (310 aa)
   
      0.898
rpmA
L27- ribosomal protein L27 (85 aa)
 
  0.887
purE
annotation not available (166 aa)
 
        0.797
polA
Pola- DNA polymerase I (930 aa)
 
 
  0.792
ruvB
ruvB- Holliday junction DNA helicase RuvB (335 aa)
   
        0.782
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (117 aa)
   
      0.763
rplQ
L17- ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family (129 aa)
   
 
  0.745
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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