STRINGSTRING
mepA protein (Pasteurella multocida) - STRING interaction network
"mepA" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mepAannotation not available (286 aa)    
Predicted Functional Partners:
DR93_1135
annotation not available (254 aa)
 
        0.971
msbB
lipid_A_msbB- lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (316 aa)
              0.818
aroC
aroC- chorismate synthase (357 aa)
   
   
  0.738
DR93_1132
Uncharacterized protein (1113 aa)
              0.694
DR93_1752
Conserved hypothetical protein (468 aa)
   
          0.692
DR93_1789
Uncharacterized protein (186 aa)
   
          0.653
menE
O-succinylbenzoic acid--CoA ligase; menE- O-succinylbenzoate-CoA ligase (472 aa)
              0.643
seqA
annotation not available (206 aa)
              0.642
DR93_1751
Uncharacterized protein (358 aa)
   
          0.627
DR93_1481
matE- MATE efflux family protein (464 aa)
       
 
  0.559
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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