STRINGSTRING
bioB protein (Pasteurella multocida) - STRING interaction network
bioB: biotin synthase in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bioBbioB- biotin synthase (336 aa)    
Predicted Functional Partners:
DR93_30
ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (213 aa)
 
  0.999
DR93_1471
ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (244 aa)
 
 
  0.995
bioA
bioA- adenosylmethionine-8-amino-7-oxononanoate transaminase (433 aa)
   
  0.986
DR93_1765
Bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; birA_ligase- biotin--[acetyl-CoA-carboxylase] ligase (312 aa)
   
 
  0.972
bioF
bioF- 8-amino-7-oxononanoate synthase (387 aa)
   
  0.939
thiQ
Uncharacterized protein; thiQ- thiamine ABC transporter, ATP-binding protein (225 aa)
         
  0.827
mviN
mviN- integral membrane protein MviN (524 aa)
           
  0.804
thiP
thiP- thiamine/thiamine pyrophosphate ABC transporter, permease protein (536 aa)
              0.767
thiB
TbpA; thiB- thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein (334 aa)
   
        0.738
lipA
lipA- lipoyl synthase (320 aa)
     
 
  0.735
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (16%) [HD]