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prmB protein (Pasteurella multocida) - STRING interaction network
"prmB" - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prmBN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; L3_gln_methyl- -(glutamine-N5) methyltransferase, ribosomal protein L3-specific (313 aa)    
Predicted Functional Partners:
DR93_1167
annotation not available (168 aa)
   
        0.688
sun
rsmB- ribosomal RNA small subunit methyltransferase B (446 aa)
   
 
  0.683
prfA
prfA- peptide chain release factor 1 (360 aa)
 
  0.652
rlmL
annotation not available (719 aa)
   
   
  0.634
cmoB
annotation not available (321 aa)
     
 
  0.546
prmA
prmA- ribosomal protein L11 methyltransferase (293 aa)
           
  0.493
mnmC
annotation not available (672 aa)
     
   
  0.470
rlmN
23S rRNA m2A2503 methyltransferase (394 aa)
     
   
  0.440
rsmH
annotation not available (321 aa)
   
 
  0.429
rlmB
annotation not available (245 aa)
 
 
  0.423
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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