STRINGSTRING
uvrB protein (Pasteurella multocida) - STRING interaction network
"uvrB" - Uvrb: excinuclease ABC subunit B in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uvrBUvrb- excinuclease ABC subunit B (678 aa)    
Predicted Functional Partners:
uvrA
Uvra- excinuclease ABC subunit A (943 aa)
 
 
  0.969
uvrC
uvrC- excinuclease ABC subunit C (608 aa)
 
  0.968
DR93_1202
annotation not available (259 aa)
              0.831
ligA
Dnlj- DNA ligase, NAD-dependent (673 aa)
 
 
  0.799
polA
Pola- DNA polymerase I (930 aa)
 
   
  0.799
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (200 aa)
   
 
  0.740
uvrD
uvrD- DNA helicase II (726 aa)
 
 
  0.728
rep
Uncharacterized protein; Rep- ATP-dependent DNA helicase Rep (671 aa)
 
 
  0.718
dnaJ
dnaJ_bact- chaperone protein DnaJ (372 aa)
 
   
  0.716
dnaA
dnaA- chromosomal replication initiator protein DnaA (451 aa)
   
   
  0.708
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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