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mrcB protein (Pasteurella multocida) - STRING interaction network
"mrcB" - PBP_1b: penicillin-binding protein 1B in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrcBPBP_1b- penicillin-binding protein 1B (775 aa)    
Predicted Functional Partners:
mrcA
annotation not available (853 aa)
   
 
0.901
DR93_1930
annotation not available (601 aa)
 
 
  0.835
pbpC
PBP_1c- penicillin-binding protein 1C (785 aa)
   
   
0.832
DR93_1229
Uncharacterized protein; Belongs to the UPF0231 family (101 aa)
              0.832
mrdA
pbp2_mrdA- penicillin-binding protein 2 (644 aa)
 
 
  0.785
erpA
annotation not available (113 aa)
              0.730
ftsW
ftsW- cell division protein FtsW (396 aa)
 
 
  0.691
DR93_1745
annotation not available (409 aa)
 
 
  0.640
mrdB
rodA_shape- rod shape-determining protein RodA; Belongs to the SEDS family (371 aa)
 
 
  0.581
murA
murA- UDP-N-acetylglucosamine 1-carboxyvinyltransferase (425 aa)
   
   
  0.526
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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