STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1257
Uncharacterized protein (261 aa)
Predicted Functional Partners:
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1
node2
node1 accession
node2 accession
node1 annotation
node2 annotation
score
DR93_1047
DR93_1257
DR93_1047
DR93_1257
annotation not available
Uncharacterized protein
0.501
DR93_1047
DR93_1972
DR93_1047
DR93_1972
annotation not available
Uncharacterized protein
0.573
DR93_1047
DR93_830
DR93_1047
DR93_830
annotation not available
annotation not available
0.521
DR93_1047
DR93_99
DR93_1047
DR93_99
annotation not available
Uncharacterized protein
0.536
DR93_1255
DR93_1257
DR93_1255
DR93_1257
annotation not available
Uncharacterized protein
0.644
DR93_1255
DR93_1258
DR93_1255
DR93_1258
annotation not available
annotation not available
0.536
DR93_1255
DR93_1259
DR93_1255
DR93_1259
annotation not available
annotation not available
0.444
DR93_1255
queF
DR93_1255
DR93_1256
annotation not available
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
0.795
DR93_1258
DR93_1255
DR93_1258
DR93_1255
annotation not available
annotation not available
0.536
DR93_1258
DR93_1257
DR93_1258
DR93_1257
annotation not available
Uncharacterized protein
0.579
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Network Stats
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Functional enrichments in your networkNote: some enrichments may be expected here (why?) explain columns
Enrichment analysis is still ongoing, please wait ...
Statistical background
For the above enrichment analysis, the following statistical background is assumed: