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DR93_1260 protein (Pasteurella multocida) - STRING interaction network
"DR93_1260" - UPF0181 protein AAUPMC_05297 in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1260UPF0181 protein AAUPMC_05297; Belongs to the UPF0181 family (54 aa)    
Predicted Functional Partners:
DR93_1259
annotation not available (243 aa)
              0.754
DR93_1262
annotation not available (148 aa)
   
          0.738
DR93_1258
annotation not available (103 aa)
              0.730
DR93_1727
annotation not available (191 aa)
   
          0.702
trpR
trpR- trp operon repressor (102 aa)
   
          0.669
mukF
annotation not available (441 aa)
   
          0.652
DR93_894
Uncharacterized protein (96 aa)
   
          0.647
DR93_1020
DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The exact function of the psi subunit is unknown (136 aa)
   
          0.641
mukB
annotation not available (1495 aa)
   
          0.610
DR93_704
annotation not available (226 aa)
   
          0.591
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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