STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1266annotation not available (324 aa)    
Predicted Functional Partners:
thrC
thrC: threonine synthase
  
 
 0.863
thrA
Bifunctional aspartokinase I/homoserine dehydrogenase I; Asp_kinase: aspartate kinase domain protein
  
 
 0.847
thrB
thrB: homoserine kinase
  
  
 0.810
truA
hisT_truA: tRNA pseudouridine(38-40) synthase
 
    0.808
metB
annotation not available
  
  
 0.675
DR93_1044
Asp_kin_monofn: aspartate kinase, monofunctional class
  
 
 0.660
ybaK
annotation not available
       0.615
guaA
guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain
  
  
 0.602
argG
argG: argininosuccinate synthase
  
  
 0.588
dapD
dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
 
  
 0.586
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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