DR93_1266 protein (Pasteurella multocida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DR93_1266

annotation not available (324 aa)

Predicted Functional Partners:

thrC

0.863

thrA

0.847

thrB

0.810

truA

0.808

metB

0.675

DR93_1044

0.660

ybaK

0.615

guaA

0.602

argG

0.588

dapD

0.586

Your Current Organism:

Pasteurella multocida

NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR93_1044	DR93_1266	DR93_1044	DR93_1266	Asp_kin_monofn- aspartate kinase, monofunctional class	annotation not available	0.660
DR93_1044	argG	DR93_1044	DR93_1652	Asp_kin_monofn- aspartate kinase, monofunctional class	argG- argininosuccinate synthase	0.850
DR93_1044	dapD	DR93_1044	DR93_1488	Asp_kin_monofn- aspartate kinase, monofunctional class	dapD- 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	0.615
DR93_1044	guaA	DR93_1044	DR93_1768	Asp_kin_monofn- aspartate kinase, monofunctional class	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	0.486
DR93_1044	thrA	DR93_1044	DR93_1953	Asp_kin_monofn- aspartate kinase, monofunctional class	Bifunctional aspartokinase I/homoserine dehydrogenase I; Asp_kinase- aspartate kinase domain protein	0.870
DR93_1044	thrB	DR93_1044	DR93_1952	Asp_kin_monofn- aspartate kinase, monofunctional class	thrB- homoserine kinase	0.814
DR93_1044	thrC	DR93_1044	DR93_1951	Asp_kin_monofn- aspartate kinase, monofunctional class	thrC- threonine synthase	0.674
DR93_1266	DR93_1044	DR93_1266	DR93_1044	annotation not available	Asp_kin_monofn- aspartate kinase, monofunctional class	0.660
DR93_1266	argG	DR93_1266	DR93_1652	annotation not available	argG- argininosuccinate synthase	0.588
DR93_1266	dapD	DR93_1266	DR93_1488	annotation not available	dapD- 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	0.586
DR93_1266	guaA	DR93_1266	DR93_1768	annotation not available	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	0.602
DR93_1266	metB	DR93_1266	DR93_977	annotation not available	annotation not available	0.675
DR93_1266	thrA	DR93_1266	DR93_1953	annotation not available	Bifunctional aspartokinase I/homoserine dehydrogenase I; Asp_kinase- aspartate kinase domain protein	0.847
DR93_1266	thrB	DR93_1266	DR93_1952	annotation not available	thrB- homoserine kinase	0.810
DR93_1266	thrC	DR93_1266	DR93_1951	annotation not available	thrC- threonine synthase	0.863
DR93_1266	truA	DR93_1266	DR93_1467	annotation not available	hisT_truA- tRNA pseudouridine(38-40) synthase	0.808
DR93_1266	ybaK	DR93_1266	DR93_1265	annotation not available	annotation not available	0.615
argG	DR93_1044	DR93_1652	DR93_1044	argG- argininosuccinate synthase	Asp_kin_monofn- aspartate kinase, monofunctional class	0.850
argG	DR93_1266	DR93_1652	DR93_1266	argG- argininosuccinate synthase	annotation not available	0.588
argG	guaA	DR93_1652	DR93_1768	argG- argininosuccinate synthase	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	0.509

page 1 of 4

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2019

Credits

Access

Info

About