STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppxannotation not available (516 aa)    
Predicted Functional Partners:
spoT
annotation not available
  
 
 0.925
DR93_70
RelA; spoT_relA: RelA/SpoT family protein
  
 
 0.925
DR93_128
Uncharacterized protein
 
     0.917
tmk
DTMP_kinase: thymidylate kinase
  
  
 0.777
DR93_127
Outer membrane protein
 
    0.673
udk
Udk: uridine kinase
      
 0.672
guaB
IMP_dehydrog: inosine-5'-monophosphate dehydrogenase
     
 0.628
phoR
phoR_proteo: phosphate regulon sensor kinase PhoR
 
   
 0.611
phoB
phoB: phosphate regulon transcriptional regulatory protein PhoB
     
 0.581
tehB
tehB: tellurite resistance protein TehB
 
      0.533
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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