STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnSGlutaminyl-tRNA synthetase; glnS: glutamine--tRNA ligase (559 aa)    
Predicted Functional Partners:
trpS
Tryptophanyl-tRNA synthetase; trpS: tryptophan--tRNA ligase
  
  
 0.807
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
   
 
 0.796
rpsM
bact_S13: 30S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family
  
 
 0.795
rpsH
annotation not available
   
 
 0.793
rpsL
rpsL_bact: ribosomal protein S12
  
 
 0.781
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
   
 
 0.777
rpsS
rpsS_bact: ribosomal protein S19
   
 
 0.777
rplW
annotation not available
   
 
 0.768
rpsC
rpsC_bact: ribosomal protein S3
   
 
 0.767
gltX
Glutamyl-tRNA synthetase; gltX_bact: glutamate--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family
 
 
0.764
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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