STRINGSTRING
DR93_1308 protein (Pasteurella multocida) - STRING interaction network
"DR93_1308" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1308annotation not available (295 aa)    
Predicted Functional Partners:
dxs
Dxs- 1-deoxy-D-xylulose-5-phosphate synthase (614 aa)
   
  0.973
uppS
Undecaprenyl pyrophosphate synthase; uppS- di-trans,poly-cis-decaprenylcistransferase (240 aa)
 
  0.969
xseB
Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family (81 aa)
   
   
  0.961
ispH
ispH_lytB- 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (314 aa)
   
  0.953
ispB
annotation not available (323 aa)
   
 
0.920
polA
Pola- DNA polymerase I (930 aa)
   
   
  0.667
ispE
ispE- 4-(cytidine 5’-diphospho)-2-C-methyl-D-erythritol kinase (295 aa)
 
 
  0.611
ispD
ispD- 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (238 aa)
   
   
  0.572
ispF
annotation not available (158 aa)
   
   
  0.555
ispG
ispG_gcpE- 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (367 aa)
   
   
  0.529
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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