STRINGSTRING
lolD protein (Pasteurella multocida) - STRING interaction network
"lolD" - Uncharacterized protein in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolDUncharacterized protein; lolD_lipo_ex- liporeleasing system, ATP-binding protein (227 aa)    
Predicted Functional Partners:
DR93_1338
Uncharacterized protein; lolCE- liporeleasing system, transmembrane , LolC/E family protein (396 aa)
  0.993
lolE
Outer membrane-specific lipoprotein transporter subunit LolE; lolE_release- liporeleasing system, transmembrane protein LolE (417 aa)
  0.992
lolB
lolB- outer membrane lipoprotein LolB (205 aa)
     
   
  0.732
ffh
Ffh- signal recognition particle protein (458 aa)
   
   
  0.723
ftsY
Uncharacterized protein; ftsY- signal recognition particle-docking protein FtsY (459 aa)
 
        0.677
DR93_728
N(6)-L-threonylcarbamoyladenine synthase; T6A_YgjD- tRNA threonylcarbamoyl adenosine modification protein YgjD (343 aa)
 
        0.674
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (129 aa)
   
        0.674
DR93_1337
Putative 2-hydroxyacid dehydrogenase HI_1556 (316 aa)
 
          0.669
DR93_1302
annotation not available (455 aa)
   
 
  0.661
macB
annotation not available (648 aa)
 
 
0.646
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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