STRINGSTRING
trpD protein (Pasteurella multocida) - STRING interaction network
"trpD" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpDannotation not available (333 aa)    
Predicted Functional Partners:
DR93_1359
annotation not available (469 aa)
 
  0.999
trpG
annotation not available (195 aa)
 
  0.999
trpE
trpE_proteo- anthranilate synthase component I (516 aa)
 
  0.998
trpA
trpA- tryptophan synthase, alpha subunit (268 aa)
   
  0.994
DR93_304
Putative anthranilate synthase component II; trpG_papA- glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein (188 aa)
   
  0.986
trpB
trpB- tryptophan synthase, beta subunit (402 aa)
   
  0.985
DR93_305
annotation not available (324 aa)
 
   
  0.902
truA
hisT_truA- tRNA pseudouridine(38-40) synthase (264 aa)
         
  0.802
aroB
aroB- 3-dehydroquinate synthase (362 aa)
   
   
  0.775
DR93_1916
Uncharacterized protein; CM_P_1- chorismate mutase (387 aa)
 
   
  0.769
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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