STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1365annotation not available (272 aa)    
Predicted Functional Partners:
yaeT
Uncharacterized protein; OM_YaeT: outer membrane assembly complex, YaeT protein
  
 
 0.949
lolA
lolA: outer membrane lipocarrier protein LolA
 
 
 0.879
DR93_641
Putative lipoprotein
  
 
 0.745
lolB
lolB: outer membrane lipoprotein LolB
  
 
 0.744
rpsU
S21p: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family
   
   0.689
rplD
rplD_bact: 50S ribosomal protein L4
  
 
 0.687
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
   
   0.677
rpsC
rpsC_bact: ribosomal protein S3
   
   0.676
rpmI
rpmI_bact: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family
   
   0.672
secA
secA: preprotein translocase, SecA subunit
  
 
 0.659
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (6%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >