STRINGSTRING
DR93_1425 protein (Pasteurella multocida) - STRING interaction network
"DR93_1425" - Tape_meas_nterm: tape measure domain protein in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1425Tape_meas_nterm- tape measure domain protein (1115 aa)    
Predicted Functional Partners:
DR93_1428
Uncharacterized protein (559 aa)
 
          0.968
DR93_1429
Uncharacterized protein; phg_TIGR02218- phage conserved hypothetical BR0599 family protein (269 aa)
 
          0.963
DR93_1432
annotation not available (929 aa)
 
          0.950
DR93_1426
Conserved hypothetical protein (330 aa)
              0.861
DR93_1433
annotation not available (86 aa)
 
          0.860
DR93_1427
Conserved hypothetical protein (320 aa)
              0.847
DR93_1422
Conserved hypothetical protein (248 aa)
 
          0.799
DR93_1419
Conserved hypothetical protein (168 aa)
 
          0.795
DR93_1417
Uncharacterized protein (121 aa)
   
          0.783
DR93_1414
annotation not available (412 aa)
 
          0.781
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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