STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttcAannotation not available (312 aa)    
Predicted Functional Partners:
msrA
msrA: peptide-methionine (S)-S-oxide reductase
     
 0.737
tusE
Uncharacterized protein; dsrC_tusE_dsvC: sulfur relay , TusE/DsrC/DsvC family protein
     
 0.617
metG
Methionyl-tRNA synthetase; metG: methionine--tRNA ligase
 
  
 0.560
mukF
annotation not available
  
    0.553
trmU
tRNA-specific 2-thiouridylase MnmA; trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
  
 
 0.528
guaA
guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain
  
  
 0.495
miaB
(Dimethylallyl)adenosine tRNA methylthiotransferase; miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB
  
  
 0.476
thiI
annotation not available
  
  
 0.474
tilS
annotation not available
   
  
 0.471
prs
annotation not available
     
 0.470
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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