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sbcB protein (Pasteurella multocida) - STRING interaction network
"sbcB" - Exonuclease C-terminal family protein in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sbcBExonuclease C-terminal family protein (475 aa)    
Predicted Functional Partners:
recJ
Uncharacterized protein; recJ- single-stranded-DNA-specific exonuclease RecJ (573 aa)
     
 
  0.726
recC
recC- exodeoxyribonuclease V, gamma subunit (1124 aa)
   
     
  0.717
recF
Recf- DNA replication and repair RecF family protein (358 aa)
     
   
  0.628
recB
recB- exodeoxyribonuclease V, beta subunit (1229 aa)
 
     
  0.599
DR93_1440
annotation not available (288 aa)
              0.574
recO
Reco- DNA repair protein RecO; Belongs to the RecO family (240 aa)
           
  0.537
mutL
annotation not available (617 aa)
     
   
  0.525
rdgC
Recombination-associated protein RdgC; May be involved in recombination (302 aa)
   
          0.501
ruvB
ruvB- Holliday junction DNA helicase RuvB (335 aa)
     
 
  0.489
ruvA
ruvA- Holliday junction DNA helicase RuvA (204 aa)
           
  0.464
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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