STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asnSAsparaginyl-tRNA synthetase; asnS: asparagine--tRNA ligase (467 aa)    
Predicted Functional Partners:
argS
Arginyl-tRNA synthetase; argS: arginine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family
  
 
 0.800
pheT
pheT_bact: phenylalanine--tRNA ligase, beta subunit
  
  
 0.777
metG
Methionyl-tRNA synthetase; metG: methionine--tRNA ligase
  
 
 0.729
ileS
Isoleucyl-tRNA synthetase; ileS: isoleucine--tRNA ligase
   
 
 0.682
pbpC
PBP_1c: penicillin-binding protein 1C
       0.650
DR93_1765
Bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase
     
 0.627
leuS
Leucyl-tRNA synthetase; leuS_bact: leucine--tRNA ligase
  
 
 0.620
glnS
Glutaminyl-tRNA synthetase; glnS: glutamine--tRNA ligase
 
 
 0.571
DR93_1451
annotation not available
 
  
 0.564
gltX
Glutamyl-tRNA synthetase; gltX_bact: glutamate--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family
 
 
 0.554
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (15%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >