STRINGSTRING
rsmI protein (Pasteurella multocida) - STRING interaction network
"rsmI" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsmIannotation not available (281 aa)    
Predicted Functional Partners:
DR93_1477
UPF0102 protein AAUPMC_06957; Belongs to the UPF0102 family (119 aa)
   
        0.723
lpoA
annotation not available (570 aa)
   
        0.704
DR93_1478
annotation not available (195 aa)
              0.697
gidB
gidB- 16S rRNA (guanine(527)-N(7))-methyltransferase GidB (210 aa)
 
     
  0.697
rlmB
annotation not available (245 aa)
 
   
  0.614
sun
rsmB- ribosomal RNA small subunit methyltransferase B (446 aa)
   
   
  0.604
rsmE
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (244 aa)
 
   
  0.597
DR93_1479
annotation not available (194 aa)
              0.597
ftsZ
ftsZ- cell division protein FtsZ (434 aa)
   
     
  0.560
rluD
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (324 aa)
   
 
  0.540
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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