STRINGSTRING
lpoA protein (Pasteurella multocida) - STRING interaction network
"lpoA" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpoAannotation not available (570 aa)    
Predicted Functional Partners:
DR93_1477
UPF0102 protein AAUPMC_06957; Belongs to the UPF0102 family (119 aa)
 
        0.947
DR93_1478
annotation not available (195 aa)
            0.916
DR93_1479
annotation not available (194 aa)
   
      0.888
DR93_2091
annotation not available (318 aa)
   
   
  0.746
DR93_121
annotation not available (421 aa)
   
        0.744
zipA
septum_zipA- cell division protein ZipA (323 aa)
   
          0.736
rsmI
annotation not available (281 aa)
   
        0.704
lolB
lolB- outer membrane lipoprotein LolB (205 aa)
   
   
  0.696
DR93_1014
Uncharacterized protein; IV_pilin_GFxxxE- prepilin-type N-terminal cleavage/methylation domain protein (175 aa)
   
      0.691
DR93_138
annotation not available (171 aa)
   
          0.683
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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