STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fnr
annotation not available (252 aa)
Predicted Functional Partners:
DR93_1500
Universal stress protein UspE
0.709
pflA
PFLA: pyruvate formate-lyase 1-activating enzyme
0.701
arcB
annotation not available
0.627
DR93_1498
annotation not available
0.592
rpoD
rpoD_Cterm: RNA polymerase sigma factor RpoD
0.580
yhb1
annotation not available
0.538
DR93_2075
2a37: transporter, monovalent cation:proton antiporter-2 family protein
0.497
rpoA
rpoA: DNA-directed RNA polymerase, alpha subunit
0.494
DR93_233
annotation not available
0.492
hpaA
hpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA