STRINGSTRING
ribA protein (Pasteurella multocida) - STRING interaction network
"ribA" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ribAannotation not available (219 aa)    
Predicted Functional Partners:
ribD
eubact_ribD- riboflavin biosynthesis protein RibD (376 aa)
  0.999
ribB
annotation not available (214 aa)
 
 
  0.990
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (157 aa)
 
   
  0.989
ribE
ribE- riboflavin synthase, alpha subunit (204 aa)
 
  0.988
folE
folE- GTP cyclohydrolase I; Belongs to the GTP cyclohydrolase I family (218 aa)
 
 
 
  0.983
moaA
moaA- molybdenum cofactor biosynthesis protein A (337 aa)
       
    0.900
nrdD
nrdD- anaerobic ribonucleoside-triphosphate reductase (713 aa)
       
  0.845
ndk
annotation not available (139 aa)
     
  0.820
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (89 aa)
   
 
    0.817
cyaA
annotation not available (838 aa)
         
  0.811
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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