STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1510annotation not available (523 aa)    
Predicted Functional Partners:
oppC
annotation not available
 
 0.852
oppB
annotation not available
 
 0.822
DR93_1511
Conserved hypothetical protein
       0.768
DR93_28
oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein
 
 
 0.762
oppD
oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein
 
 
 0.760
DR93_1754
annotation not available
 
 
 0.602
dppF
oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein; Belongs to the ABC transporter superfamily
 
 
 0.555
sapC
annotation not available
 
 
 0.547
DR93_1753
annotation not available
 
   
 0.546
DR93_1512
annotation not available
   
   0.541
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (10%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >