STRINGSTRING
xth protein (Pasteurella multocida) - STRING interaction network
"xth" - exoDNase_III: exodeoxyribonuclease III in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xthexoDNase_III- exodeoxyribonuclease III (267 aa)    
Predicted Functional Partners:
nth
Nth- endonuclease III (210 aa)
 
 
 
  0.883
DR93_1524
annotation not available (257 aa)
              0.854
polA
Pola- DNA polymerase I (930 aa)
   
 
  0.738
recA
tigrfam_recA- protein RecA (354 aa)
   
 
  0.632
metG
Methionyl-tRNA synthetase; metG- methionine--tRNA ligase (682 aa)
   
   
  0.627
ribD
eubact_ribD- riboflavin biosynthesis protein RibD (376 aa)
         
  0.617
ung
Ung- uracil-DNA glycosylase; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family (222 aa)
     
 
  0.595
mutY
mutY- A/G-specific adenine glycosylase (378 aa)
     
 
  0.589
hisB
annotation not available (363 aa)
   
 
  0.563
dnaN
Dnan- DNA polymerase III, beta subunit (366 aa)
   
 
  0.495
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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