STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1538Slp: outer membrane lipo, Slp family protein (179 aa)    
Predicted Functional Partners:
rnd
Rnd: ribonuclease D
    0.842
DR93_1537
annotation not available
 
    0.819
DR93_1540
Dnt; Helicase C-terminal domain protein
 
    0.802
yeaZ
Uncharacterized protein; T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ
  
    0.754
DR93_918
NlpB protein
  
    0.634
skp
annotation not available
  
   
 0.585
DR93_1524
annotation not available
  
     0.578
DR93_1541
annotation not available
       0.523
DR93_1533
UPF0208 membrane protein AAUPMC_07492
  
     0.500
DR93_1975
Opacity-associated A N-terminal motif family protein
  
 
   0.453
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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