STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrdBannotation not available (376 aa)    
Predicted Functional Partners:
DR93_1547
nrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit
 
 0.999
cmk
Cmk: cytidylate kinase
    
 0.938
DR93_1551
annotation not available
 
     0.926
tmk
DTMP_kinase: thymidylate kinase
    
 0.921
gmk
Guanyl_kin: guanylate kinase
   
 
 0.918
adk
Adk: adenylate kinase family protein
     
 0.916
ndk
annotation not available
   
 
 0.916
spoT
annotation not available
   
 
  0.902
pnp
Polynucleotide phosphorylase/polyadenylase; Polynuc_phos: polyribonucleotide nucleotidyltransferase
  
 
  0.902
pyk
Pyruv_kin: pyruvate kinase; Belongs to the pyruvate kinase family
     
 0.900
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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