STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1553annotation not available (349 aa)    
Predicted Functional Partners:
DR93_1552
annotation not available
 0.996
DR93_1554
annotation not available
 0.996
DR93_1555
annotation not available
 
   
 0.933
glpE
annotation not available
    
  0.901
DR93_1556
annotation not available
 
     0.855
DR93_1182
FdxG; formate-DH-alph: formate dehydrogenase, alpha subunit
  
 
 0.760
nrfC
NrfC; cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein
 
 0.543
dmsB
DMSO_dmsB: dimethylsulfoxide reductase, chain B
 
 0.492
napG
Quinol dehydrogenase periplasmic component; mauM_napG: MauM/NapG ferredoxin-type family protein
 
 
 0.470
DR93_1623
Uncharacterized protein
     
 0.462
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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