STRINGSTRING
nusB protein (Pasteurella multocida) - STRING interaction network
"nusB" - Transcription antitermination protein NusB in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nusBTranscription antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons (144 aa)    
Predicted Functional Partners:
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (157 aa)
 
   
  0.994
nusG
Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination (183 aa)
   
 
  0.967
rpsJ
rpsJ_bact- ribosomal protein S10 (103 aa)
       
 
  0.958
thiL
thiL- thiamine-monophosphate kinase (330 aa)
   
   
  0.919
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (89 aa)
   
 
  0.901
rpoA
rpoA- DNA-directed RNA polymerase, alpha subunit (329 aa)
     
 
  0.889
pgpA
annotation not available (161 aa)
   
   
  0.876
nusA
annotation not available (493 aa)
   
 
  0.860
rpoB
rpoB- DNA-directed RNA polymerase, beta subunit (1342 aa)
     
 
  0.855
DR93_1558
Uncharacterized protein; 2A76- homoserine/Threonine efflux family protein (213 aa)
         
  0.815
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (15%) [HD]