STRINGSTRING
DR93_1565 protein (Pasteurella multocida) - STRING interaction network
"DR93_1565" - degP_htrA_DO: peptidase Do family protein in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1565degP_htrA_DO- peptidase Do family protein (459 aa)    
Predicted Functional Partners:
ompA
annotation not available (352 aa)
     
 
  0.650
DR93_233
annotation not available (861 aa)
   
   
  0.571
DR93_464
annotation not available (463 aa)
   
   
  0.537
DR93_1745
annotation not available (409 aa)
 
   
  0.521
arcB
annotation not available (618 aa)
   
 
  0.514
DR93_1564
annotation not available (220 aa)
              0.503
DR93_1365
annotation not available (272 aa)
     
 
  0.502
DR93_758
annotation not available (310 aa)
   
 
  0.477
rpoE
rpoE_Sigma70- RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily (191 aa)
   
   
  0.464
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family (193 aa)
   
 
  0.449
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (21%) [HD]