STRINGSTRING
degS protein (Pasteurella multocida) - STRING interaction network
"degS" - DegS in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
degSDegS; protease_degS- periplasmic serine peptidase DegS (342 aa)    
Predicted Functional Partners:
ribD
eubact_ribD- riboflavin biosynthesis protein RibD (376 aa)
   
   
  0.898
nrdR
annotation not available (149 aa)
              0.849
yfbR
5’-deoxynucleotidase; Catalyzes the strictly specific dephosphorylation of 2’- deoxyribonucleoside 5’-monophosphates; Belongs to the 5DNU family (199 aa)
   
        0.807
ompA
annotation not available (352 aa)
     
 
  0.650
DR93_1583
annotation not available (197 aa)
              0.591
DR93_233
annotation not available (861 aa)
   
   
  0.571
DR93_464
annotation not available (463 aa)
   
   
  0.537
DR93_149
MclA; Anti sigma-E RseA, N-terminal domain protein (196 aa)
 
 
  0.528
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family (193 aa)
   
 
  0.516
dnaJ
dnaJ_bact- chaperone protein DnaJ (372 aa)
   
   
  0.516
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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