STRINGSTRING
nrdR protein (Pasteurella multocida) - STRING interaction network
"nrdR" - annotation not available in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrdRannotation not available (149 aa)    
Predicted Functional Partners:
ribD
eubact_ribD- riboflavin biosynthesis protein RibD (376 aa)
 
 
  0.954
degS
DegS; protease_degS- periplasmic serine peptidase DegS (342 aa)
              0.849
yfbR
5’-deoxynucleotidase; Catalyzes the strictly specific dephosphorylation of 2’- deoxyribonucleoside 5’-monophosphates; Belongs to the 5DNU family (199 aa)
              0.796
DR93_1583
annotation not available (197 aa)
              0.591
thiL
thiL- thiamine-monophosphate kinase (330 aa)
   
   
  0.576
nrdD
nrdD- anaerobic ribonucleoside-triphosphate reductase (713 aa)
 
     
  0.552
DR93_1765
Bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; birA_ligase- biotin--[acetyl-CoA-carboxylase] ligase (312 aa)
           
  0.535
argR
argR_whole- arginine repressor (155 aa)
           
  0.455
polA
Pola- DNA polymerase I (930 aa)
   
   
  0.436
ligA
Dnlj- DNA ligase, NAD-dependent (673 aa)
           
  0.426
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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