STRINGSTRING
infB protein (Pasteurella multocida) - STRING interaction network
"infB" - IF-2: translation initiation factor IF-2 in Pasteurella multocida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
infBIF-2- translation initiation factor IF-2 (833 aa)    
Predicted Functional Partners:
nusA
annotation not available (493 aa)
 
  0.993
rpsM
bact_S13- 30S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family (118 aa)
   
 
  0.965
rpoB
rpoB- DNA-directed RNA polymerase, beta subunit (1342 aa)
 
 
  0.958
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (132 aa)
 
   
  0.944
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (129 aa)
   
 
  0.940
rplB
rplB_bact- ribosomal protein L2 (273 aa)
   
 
  0.933
rpsH
annotation not available (130 aa)
   
 
  0.926
rpsE
rpsE_bact- ribosomal protein S5 (166 aa)
   
 
  0.926
rimP
annotation not available (151 aa)
 
   
  0.924
rplE
annotation not available (179 aa)
   
 
  0.907
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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