STRINGSTRING
rimP protein (Pasteurella multocida) - STRING interaction network
"rimP" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimPannotation not available (151 aa)    
Predicted Functional Partners:
nusA
annotation not available (493 aa)
 
        0.995
infB
IF-2- translation initiation factor IF-2 (833 aa)
 
   
  0.924
truB
truB- tRNA pseudouridine(55) synthase (304 aa)
   
   
  0.627
guaB
IMP_dehydrog- inosine-5’-monophosphate dehydrogenase (487 aa)
   
   
  0.625
secD
Preprotein translocase subunit SecD; secD- -export membrane protein SecD (616 aa)
 
   
  0.574
tgt
Q_tRNA_tgt- queuine tRNA-ribosyltransferase (385 aa)
   
   
  0.531
sun
rsmB- ribosomal RNA small subunit methyltransferase B (446 aa)
 
   
  0.518
leuA
leuA_bact- 2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family (518 aa)
         
  0.513
thrA
Bifunctional aspartokinase I/homoserine dehydrogenase I; Asp_kinase- aspartate kinase domain protein (815 aa)
         
  0.500
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (132 aa)
   
 
  0.494
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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