STRINGSTRING
ydiI protein (Pasteurella multocida) - STRING interaction network
"ydiI" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydiIannotation not available (139 aa)    
Predicted Functional Partners:
DR93_1623
Uncharacterized protein (1028 aa)
   
   
  0.900
hemH
hemH- ferrochelatase; Belongs to the ferrochelatase family (326 aa)
              0.847
DR93_486
Cof-sub- Cof-like hydrolase family protein (271 aa)
 
            0.726
DR93_2025
Isochor_syn- isochorismate synthase family protein (431 aa)
 
   
  0.592
menB
menB- naphthoate synthase (285 aa)
 
     
  0.533
yhb1
annotation not available (384 aa)
         
  0.466
ybgC
thio_ybgC- tol-pal system-associated acyl-CoA thioesterase (136 aa)
   
   
  0.459
DR93_1916
Uncharacterized protein; CM_P_1- chorismate mutase (387 aa)
         
  0.443
metG
Methionyl-tRNA synthetase; metG- methionine--tRNA ligase (682 aa)
   
      0.432
menD
menD- 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase (568 aa)
 
     
  0.427
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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