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ihfB protein (Pasteurella multocida) - STRING interaction network
"ihfB" - Integration host factor subunit beta in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ihfBIntegration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (94 aa)    
Predicted Functional Partners:
rpsA
rpsA- ribosomal protein S1 (549 aa)
 
   
  0.982
cmk
Cmk- cytidylate kinase (222 aa)
     
  0.976
ihfA
himA- integration host factor, alpha subunit; Belongs to the bacterial histone-like protein family (98 aa)
   
 
0.939
serC
3-phosphoserine/phosphohydroxythreonine aminotransferase; serC_1- phosphoserine transaminase (360 aa)
         
  0.748
DR93_1638
annotation not available (395 aa)
              0.711
pyrF
pyrF- orotidine 5’-phosphate decarboxylase (233 aa)
   
   
  0.708
lapA
Probable lipopolysaccharide assembly protein A; Involved in the assembly of lipopolysaccharide (LPS) (98 aa)
              0.670
tyrA
annotation not available (374 aa)
         
  0.592
ygiW
annotation not available (123 aa)
           
  0.580
lsrB
annotation not available (338 aa)
           
  0.579
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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