STRINGSTRING
rpsA protein (Pasteurella multocida) - STRING interaction network
rpsA: ribosomal protein S1 in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpsArpsA- ribosomal protein S1 (549 aa)    
Predicted Functional Partners:
cmk
Cmk- cytidylate kinase (222 aa)
 
   
  0.992
rpsB
rpsB_bact- ribosomal protein S2 (240 aa)
 
 
  0.989
rpsE
rpsE_bact- ribosomal protein S5 (166 aa)
 
 
  0.987
rpsC
rpsC_bact- ribosomal protein S3 (235 aa)
 
 
  0.985
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (163 aa)
     
 
  0.985
rpsG
rpsG_bact- ribosomal protein S7 (156 aa)
     
 
  0.983
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (206 aa)
 
 
  0.982
rpsJ
rpsJ_bact- ribosomal protein S10 (103 aa)
 
 
  0.982
ihfB
Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (94 aa)
 
   
  0.982
rpsL
rpsL_bact- ribosomal protein S12 (124 aa)
     
 
  0.981
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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